miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|80466008|gb|DV642921.1|DV642921 TTCGGCCAAAAACTGCTTACTGCTGCCTTCTGCGGCGGCTCTCGTGGCTTCATAAAGAACGCTGCTGCTGGTTACTATGC
CAACCGTGGAGGAGCCACTTGGGCACCAGATTATGAATGGATCAAGCAGTTTGAGGGTCCAATTCTTCTGCCCCCGGAAG
AGCAGGACAATCTTCCACCACCTCTTTGGATGCAGAGGAAACCCCCGTTTGAGAAAAAGATTCGCAACGTAACCATCAAC
TTTGGTCCCCAGCACCCAGCAGCCCACGGTGTGCTGAGGCTGGTGCTGGAGCTGGATGGTGAGACTGTGATGCGTGCAGA
TCCCCACATTGGGCTGCTGCACCGAGGAACAGAGAAGCTCATTGAATACAAGACATACACGCAGGCTCTTCCATACTTTG
ACCGTCTTGACTATGTGTCCATGATGTGCAATGAACAGGCATATTCGCTGGCTGTGGAGAAACTGCTCGGCCTGGAGGCT
CCCATCAGGGCCAAGTACATCCGTACCATGTTTGCTGAGGTTACACGCATCTTGAATCACTGCATGTTCTTGGGGGCTCA
CGCTATGGATGTGGGCGCCCTCACTCCTTTCCTGTGGCTCTTTGAGGAACGTGAGAAGATGATGGAGTTCTATGAGAGAG
CTTCTGGTGCTCGCCTTCATGCAGCCTACGTTCGTCCTGGTGGAGTGGCCATTGACATCCCATTGGCCTC




Most similar to sp|Q0MQG3|NDUS2_PONPY

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q0MQG3|NDUS2_PONPY NADH dehydrogenase [ubiquinone] iron-sulfur
           protein 2, mitochondrial OS=Pongo pygmaeus GN=NDUFS2
           PE=2 SV=1
          Length = 463

 Score =  302 bits (773), Expect = 2e-81
 Identities = 138/202 (68%), Positives = 164/202 (81%)
 Frame = +1

Query: 100 WAPDYEWIKQFEGPILLPPEEQDNLPPPLWMQRKPPFEKKIRNVTINFGPQHPAAHGVLR 279
           W PD EW +QF G ++ P +E  +  PP W   +PP +  ++N+T+NFGPQHPAAHGVLR
Sbjct: 37  WQPDVEWAQQFGGAVMYPSKETAHWKPPPWNDVEPPKDTIVKNMTLNFGPQHPAAHGVLR 96

Query: 280 LVLELDGETVMRADPHIGLLHRGTEKLIEYKTYTQALPYFDRLDYVSMMCNEQAYSLAVE 459
           LV+EL GE V + DPHIGLLHRGTEKLIEYKTY QALPYFDRLDYVSMMCNEQAYSLAVE
Sbjct: 97  LVMELSGEMVRKCDPHIGLLHRGTEKLIEYKTYLQALPYFDRLDYVSMMCNEQAYSLAVE 156

Query: 460 KLLGLEAPIRAKYIRTMFAEVTRILNHCMFLGAHAMDVGALTPFLWLFEEREKMMEFYER 639
           KLL +  P RA++IR +F E+TR+LNH M +  HA+D+GA+TPF WLFEEREKM EFYER
Sbjct: 157 KLLNIRPPPRAQWIRVLFGEITRLLNHIMAVTTHALDLGAMTPFFWLFEEREKMFEFYER 216

Query: 640 ASGARLHAAYVRPGGVAIDIPL 705
            SGAR+HAAY+RPGGV  D+PL
Sbjct: 217 VSGARMHAAYIRPGGVHQDLPL 238